glct_secir/parameters.h File Reference

#include "memilio/config.h"
#include "memilio/utils/parameter_set.h"
#include "memilio/math/eigen.h"
#include "memilio/math/floating_point.h"
#include "memilio/epidemiology/uncertain_matrix.h"
#include "memilio/utils/logging.h"

Include dependency graph for glct_secir/parameters.h:

This graph shows which files directly or indirectly include this file:

Go to the source code of this file.

Classes
struct	mio::glsecir::ContactPatterns< FP >
	The contact patterns within the society are modelled using an UncertainContactMatrix. More...
class	mio::glsecir::Parameters< FP >
	Parameters of an GLCT-SECIR model. More...
struct	mio::glsecir::RelativeTransmissionNoSymptoms< FP >
	The relative InfectedNoSymptoms infectability. More...
struct	mio::glsecir::RiskOfInfectionFromSymptomatic< FP >
	The risk of infection from symptomatic cases in the GLCT-SECIR model. More...
struct	mio::glsecir::Seasonality< FP >
	The seasonality in the GLCT-SECIR model. More...
struct	mio::glsecir::StartDay< FP >
	The start day in the GLCT-SECIR model. More...
struct	mio::glsecir::StartingProbabilitiesExposed< FP >
	Vector with the probability to start in any of the subcompartments of the Exposed compartment. More...
struct	mio::glsecir::StartingProbabilitiesInfectedCritical< FP >
	Vector with the probability to start in any of the subcompartments of the InfectedCritical compartment. More...
struct	mio::glsecir::StartingProbabilitiesInfectedNoSymptoms< FP >
	Vector with the probability to start in any of the subcompartments of the InfectedNoSymptoms compartment. More...
struct	mio::glsecir::StartingProbabilitiesInfectedSevere< FP >
	Vector with the probability to start in any of the subcompartments of the InfectedSevere compartment. More...
struct	mio::glsecir::StartingProbabilitiesInfectedSymptoms< FP >
	Vector with the probability to start in any of the subcompartments of the InfectedSymptoms compartment. More...
struct	mio::glsecir::TransitionMatrixExposedToInfectedNoSymptoms< FP >
	Transition matrix of the Exposed compartment. More...
struct	mio::glsecir::TransitionMatrixInfectedCriticalToDead< FP >
	Transition matrix of the phase-type distribution describing the stay time in the InfectedCritical compartment before death. More...
struct	mio::glsecir::TransitionMatrixInfectedCriticalToRecovered< FP >
	Transition matrix of the phase-type distribution describing the stay time in the InfectedCritical compartment before recovery. More...
struct	mio::glsecir::TransitionMatrixInfectedNoSymptomsToInfectedSymptoms< FP >
	Transition matrix of the phase-type distribution describing the stay time in the InfectedNoSymptoms compartment before developing symptoms. More...
struct	mio::glsecir::TransitionMatrixInfectedNoSymptomsToRecovered< FP >
	Transition matrix of the phase-type distribution describing the stay time in the InfectedNoSymptoms compartment before recovery. More...
struct	mio::glsecir::TransitionMatrixInfectedSevereToInfectedCritical< FP >
	Transition matrix of the phase-type distribution describing the stay time in the InfectedSevere compartment before treated by ICU. More...
struct	mio::glsecir::TransitionMatrixInfectedSevereToRecovered< FP >
	Transition matrix of the phase-type distribution describing the stay time in the InfectedSevere compartment before recovery. More...
struct	mio::glsecir::TransitionMatrixInfectedSymptomsToInfectedSevere< FP >
	Transition matrix of the phase-type distribution describing the stay time in the InfectedNoSymptoms compartment before going to hospital. More...
struct	mio::glsecir::TransitionMatrixInfectedSymptomsToRecovered< FP >
	Transition matrix of the phase-type distribution describing the stay time in the InfectedSymptoms compartment before recovery. More...
struct	mio::glsecir::TransmissionProbabilityOnContact< FP >
	Probability of getting infected from a contact. More...

Namespaces
	mio
	A collection of classes to simplify handling of matrix shapes in meta programming.
	mio::glsecir

Typedefs
template<typename FP >
using	mio::glsecir::ParametersBase = ParameterSet< StartingProbabilitiesExposed< FP >, TransitionMatrixExposedToInfectedNoSymptoms< FP >, StartingProbabilitiesInfectedNoSymptoms< FP >, TransitionMatrixInfectedNoSymptomsToInfectedSymptoms< FP >, TransitionMatrixInfectedNoSymptomsToRecovered< FP >, StartingProbabilitiesInfectedSymptoms< FP >, TransitionMatrixInfectedSymptomsToInfectedSevere< FP >, TransitionMatrixInfectedSymptomsToRecovered< FP >, StartingProbabilitiesInfectedSevere< FP >, TransitionMatrixInfectedSevereToInfectedCritical< FP >, TransitionMatrixInfectedSevereToRecovered< FP >, StartingProbabilitiesInfectedCritical< FP >, TransitionMatrixInfectedCriticalToDead< FP >, TransitionMatrixInfectedCriticalToRecovered< FP >, TransmissionProbabilityOnContact< FP >, ContactPatterns< FP >, RelativeTransmissionNoSymptoms< FP >, RiskOfInfectionFromSymptomatic< FP >, StartDay< FP >, Seasonality< FP > >