ode_secirvvs/parameters.h File Reference

#include "memilio/epidemiology/age_group.h"
#include "memilio/epidemiology/dynamic_npis.h"
#include "memilio/epidemiology/simulation_day.h"
#include "memilio/epidemiology/uncertain_matrix.h"
#include "memilio/utils/custom_index_array.h"
#include "memilio/utils/parameter_set.h"
#include "memilio/utils/uncertain_value.h"

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Classes
struct	mio::osecirvvs::ContactPatterns< FP >
	the contact patterns within the society are modelled using an UncertainContactMatrix More...
struct	mio::osecirvvs::CriticalPerSevere< FP >
	the percentage of ICU patients per hospitalized patients in the SECIR model More...
struct	mio::osecirvvs::DailyFullVaccinations< FP >
	Total number of full vaccinations up to the given day. More...
struct	mio::osecirvvs::DailyPartialVaccinations< FP >
	Total number of first vaccinations up to the given day. More...
struct	mio::osecirvvs::DaysUntilEffectiveImprovedImmunity< FP >
	Time in days until second vaccine dose takes full effect. More...
struct	mio::osecirvvs::DaysUntilEffectivePartialImmunity< FP >
	Time in days until first vaccine dose takes full effect. More...
struct	mio::osecirvvs::DeathsPerCritical< FP >
	the percentage of dead patients per ICU patients in the SECIR model More...
struct	mio::osecirvvs::DynamicNPIsImplementationDelay< FP >
	The delay with which DynamicNPIs are implemented and enforced after exceedance of threshold. More...
struct	mio::osecirvvs::DynamicNPIsInfectedSymptoms< FP >
	the NPIs that are enforced if certain infection thresholds are exceeded. More...
struct	mio::osecirvvs::ICUCapacity< FP >
	the icu capacity in the SECIR model More...
struct	mio::osecirvvs::InfectiousnessNewVariant< FP >
	Represents the relative infectiousness of a new variant. More...
struct	mio::osecirvvs::MaxRiskOfInfectionFromSymptomatic< FP >
	risk of infection from symptomatic cases increases as test and trace capacity is exceeded. More...
class	mio::osecirvvs::Parameters< FP >
	Parameters of an age-resolved SECIR/SECIHURD model with paths for partial and improved immunity through vaccination. More...
struct	mio::osecirvvs::RecoveredPerInfectedNoSymptoms< FP >
	the percentage of asymptomatic cases in the SECIR model More...
struct	mio::osecirvvs::ReducExposedImprovedImmunity< FP >
	Factor to reduce infection risk for persons with improved immunity. More...
struct	mio::osecirvvs::ReducExposedPartialImmunity< FP >
	Factor to reduce infection risk for persons with partial immunity. More...
struct	mio::osecirvvs::ReducInfectedSevereCriticalDeadImprovedImmunity< FP >
	Factor to reduce risk of hospitalization for persons with improved immunity. More...
struct	mio::osecirvvs::ReducInfectedSevereCriticalDeadPartialImmunity< FP >
	Factor to reduce risk of hospitalization for persons with partial immunity. More...
struct	mio::osecirvvs::ReducInfectedSymptomsImprovedImmunity< FP >
	Factor to reduce risk of developing symptoms for persons with improved immunity. More...
struct	mio::osecirvvs::ReducInfectedSymptomsPartialImmunity< FP >
	Factor to reduce risk of developing symptoms for persons with partial immunity. More...
struct	mio::osecirvvs::ReducTimeInfectedMild< FP >
	Factor to reduce infectious time of persons with partial or improved immunity. More...
struct	mio::osecirvvs::RelativeTransmissionNoSymptoms< FP >
	the relative InfectedNoSymptoms infectability More...
struct	mio::osecirvvs::RiskOfInfectionFromSymptomatic< FP >
	the risk of infection from symptomatic cases in the SECIR model More...
struct	mio::osecirvvs::Seasonality< FP >
	the seasonality in the SECIR model the seasonality is given as (1+k*sin()) where the sine curve is below one in summer and above one in winter More...
struct	mio::osecirvvs::SeverePerInfectedSymptoms< FP >
	the percentage of hospitalized patients per infected patients in the SECIR model More...
struct	mio::osecirvvs::StartDay< FP >
	the start day in the SECIRVVS model The start day defines in which season the simulation can be started If the start day is 180 and simulation takes place from t0=0 to tmax=100 the days 180 to 280 of the year are simulated More...
struct	mio::osecirvvs::StartDayNewVariant< FP >
	the start day of a new variant in the SECIRVVS model The start day of the new variant defines in which day of the simulation the new variant is introduced. More...
struct	mio::osecirvvs::TestAndTraceCapacity< FP >
	capacity to test and trace contacts of infected for quarantine per day. More...
struct	mio::osecirvvs::TestAndTraceCapacityMaxRiskNoSymptoms< FP >
	Multiplier for the test and trace capacity to determine when it is considered overloaded from cases without symptoms. More...
struct	mio::osecirvvs::TestAndTraceCapacityMaxRiskSymptoms< FP >
	Multiplier for the test and trace capacity to determine when it is considered overloaded by symptomatic cases. More...
struct	mio::osecirvvs::TimeExposed< FP >
	the (mean) latent time in day unit More...
struct	mio::osecirvvs::TimeInfectedCritical< FP >
	the time people are treated by ICU before returning home in the SECIR model in day unit More...
struct	mio::osecirvvs::TimeInfectedNoSymptoms< FP >
	the (mean) time in day unit for asymptomatic cases that are infected but have not yet developed symptoms. More...
struct	mio::osecirvvs::TimeInfectedSevere< FP >
	the time people are 'simply' hospitalized before returning home in the SECIR model in day unit More...
struct	mio::osecirvvs::TimeInfectedSymptoms< FP >
	the infectious time for symptomatic cases that are infected but who do not need to be hospitalized in the SECIR model in day unit More...
struct	mio::osecirvvs::TransmissionProbabilityOnContact< FP >
	probability of getting infected from a contact More...
struct	mio::osecirvvs::VaccinationGap< FP >
	Time in days between first and second vaccine dose. More...

Namespaces
	mio
	A collection of classes to simplify handling of matrix shapes in meta programming.
	mio::osecirvvs

Typedefs
template<typename FP >
using	mio::osecirvvs::ParametersBase = ParameterSet< StartDay< FP >, Seasonality< FP >, ICUCapacity< FP >, TestAndTraceCapacity< FP >, TestAndTraceCapacityMaxRiskNoSymptoms< FP >, TestAndTraceCapacityMaxRiskSymptoms< FP >, ContactPatterns< FP >, DynamicNPIsImplementationDelay< FP >, DynamicNPIsInfectedSymptoms< FP >, TimeExposed< FP >, TimeInfectedNoSymptoms< FP >, TimeInfectedSymptoms< FP >, TimeInfectedSevere< FP >, TimeInfectedCritical< FP >, TransmissionProbabilityOnContact< FP >, RelativeTransmissionNoSymptoms< FP >, RecoveredPerInfectedNoSymptoms< FP >, RiskOfInfectionFromSymptomatic< FP >, MaxRiskOfInfectionFromSymptomatic< FP >, SeverePerInfectedSymptoms< FP >, CriticalPerSevere< FP >, DeathsPerCritical< FP >, VaccinationGap< FP >, DaysUntilEffectivePartialImmunity< FP >, DaysUntilEffectiveImprovedImmunity< FP >, DailyFullVaccinations< FP >, DailyPartialVaccinations< FP >, ReducExposedPartialImmunity< FP >, ReducExposedImprovedImmunity< FP >, ReducInfectedSymptomsPartialImmunity< FP >, ReducInfectedSymptomsImprovedImmunity< FP >, ReducInfectedSevereCriticalDeadPartialImmunity< FP >, ReducInfectedSevereCriticalDeadImprovedImmunity< FP >, ReducTimeInfectedMild< FP >, InfectiousnessNewVariant< FP >, StartDayNewVariant< FP > >