mio::oseirv::Parameters< FP > Class Template Reference

Parameter set for the age-resolved SEIRV model (S,E,I,R plus vaccinated states) as per the appendix. More...

#include <parameters.h>

Inheritance diagram for mio::oseirv::Parameters< FP >:

Collaboration diagram for mio::oseirv::Parameters< FP >:

Public Member Functions
bool	apply_constraints ()
	Checks whether all Parameters satisfy their corresponding constraints and applies them, if they do not. More...
bool	check_constraints () const
	Checks whether all Parameters satisfy their corresponding constraints and logs an error if constraints are not satisfied. More...
AgeGroup	get_num_groups () const
	Returns the number of age groups. More...
	Parameters (AgeGroup ng)
	Construct with the number of age groups. More...
Public Member Functions inherited from mio::ParameterSet< Tags >
template<class Tag >
ParameterTagTraits< Tag >::Type &	get ()
	get value of a parameter More...
template<class Tag >
const ParameterTagTraits< Tag >::Type &	get () const
	get value of a parameter More...
bool	operator!= (const ParameterSet &b) const
bool	operator== (const ParameterSet &b) const
template<class Dummy = void, class = std::enable_if_t< details::AllOf<has_get_default_member_function, ParameterTagTraits<Tags>...>::value, Dummy>>
	ParameterSet ()
	default initializing constructor Initializes each parameter using either the get_default function defined in the parameter tag or the default constructor. More...
template<class Dummy = void, class = std::enable_if_t<details::AllOf<std::is_default_constructible, typename Tags::Type...>::value, Dummy>>
	ParameterSet (NoDefaultInit)
	Non-initializing default constructor. More...
template<class T1 , class... TN, class = std::enable_if_t< !std::is_same_v<std::decay_t<T1>, ParameterSet> && details::AllOf<details::BindTail<has_get_default_member_function, T1, TN...>::template type, ParameterTagTraits<Tags>...>::value>>
	ParameterSet (T1 &&arg1, TN &&... argn)
	default initializing constructor. More...
template<class IOContext >
void	serialize (IOContext &io) const
	serialize this. More...
template<class Tag >
void	set (const typename ParameterTagTraits< Tag >::Type &value)
	set value of a parameter More...
template<class Tag , class T >
void	set (T &&arg)
	set value of a parameter More...
template<class Tag , class... T>
std::enable_if_t< has_get_default_member_function< ParameterTagTraits< Tag >, T... >::value, void >	set_default (T &&... ts)
	(re)set parameter to its default value More...

Private Attributes
AgeGroup	m_num_groups

Additional Inherited Members
Static Public Member Functions inherited from mio::ParameterSet< Tags >
template<class IOContext >
static IOResult< ParameterSet >	deserialize (IOContext &io)
	deserialize an object of this class. More...
static constexpr size_t	size ()
	returns the number of parameters More...

Detailed Description

template<class FP>
class mio::oseirv::Parameters< FP >

Parameter set for the age-resolved SEIRV model (S,E,I,R plus vaccinated states) as per the appendix.

Contains seasonality, contact-pattern and immunity/vaccination parameters. Model time unit is week; contact matrices may be time-dependent (damping).

Constructor & Destructor Documentation

Parameters()

template<class FP >

mio::oseirv::Parameters< FP >::Parameters ( AgeGroup  ng )

inline

Construct with the number of age groups.

Parameters

ng	Number of age groups.

Member Function Documentation

apply_constraints()

template<class FP >

bool mio::oseirv::Parameters< FP >::apply_constraints ( )

inline

Checks whether all Parameters satisfy their corresponding constraints and applies them, if they do not.

Time spans cannot be negative and probabilities can only take values between [0,1].

Attention: This function should be used with care. It is necessary for some test problems to run through quickly, but in a manual execution of an example, check_constraints() may be preferred. Note that the apply_constraints() function can and will not set Parameters to meaningful values in an epidemiological or virological context, as all models are designed to be transferable to multiple diseases. Consequently, only acceptable (like 0 or 1 for probabilities or small positive values for time spans) values are set here and a manual adaptation may often be necessary to have set meaningful values.

Returns

Returns true if one ore more constraint were corrected, false otherwise.

check_constraints()

template<class FP >

bool mio::oseirv::Parameters< FP >::check_constraints ( ) const

inline

Checks whether all Parameters satisfy their corresponding constraints and logs an error if constraints are not satisfied.

Returns

Returns true if one constraint is not satisfied, otherwise false.

get_num_groups()

template<class FP >

AgeGroup mio::oseirv::Parameters< FP >::get_num_groups ( ) const

inline

Returns the number of age groups.

Member Data Documentation

m_num_groups

template<class FP >

AgeGroup mio::oseirv::Parameters< FP >::m_num_groups

private